Revealing cancer driver genes through integrative transcriptomic and epigenomic analyses with Moonlight
Table 3
Significance of association between Moonlight’s gene sets and genes from the Cancer Gene Census (CGC) evaluated using Fisher’s exact test in three cancer (sub)types: basal-like breast cancer, lung adenocarcinoma, and thyroid carcinoma. The gene sets from Moonlight were found using Moonlight’s primary layer and Moonlight’s secondary layer through the Gene Methylation Analysis (GMA) functionality. p-values and odds ratios from Fisher’s exact test are includned.