Integrating multiple spatial transcriptomics data using community-enhanced graph contrastive learning
Fig 3
Benchmarking Tacos with other methods on the MOB dataset.
(A) Visualization of spatial domain detection results of Tacos, STAligner, SPIRAL, SLAT, Harmony and Scanpy. (B) UMAP visualization of Tacos aligned space colored by louvain clusters and platforms. The expression levels of Atp2b4 and Fxyd6 are also shown. (C) Spatial visualization of spatial domains identified by Tacos and corresponding marker genes from Slide-seq slice (top) and Stereo-seq slice (bottom). The layers progressed from the outer to the inner layers, including the olfactory nerve layer (ONL), glomerular layer (GL), external plexiform layer (EPL), mitral cell layer (MCL), granule cell layer (GCL), rostral migratory stream (RMS), granular layer of the accessory olfactory bulb and accessory olfactory bulb.