scTrans: Sparse attention powers fast and accurate cell type annotation in single-cell RNA-seq data
Fig 6
Batch correction and cell subtypes identification in PBMC45k. (a) Umap visualization results of latent representation generated by scTrans, scVI and trVAE, including donors, cell types and sequencing technology. (b) The expression of marker genes in six B cell subtypes. (c) The density of B cell subtypes and the expression of marker genes in latent representation generated by scTrans.