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Learning predictive signatures of HLA type from T-cell repertoires

Fig 2

Algorithm variants.

(A) Comparison of AUCs between the basic classifier (based on exact matches with HLA-associated TCR), and a classifier where single amino acid variants are counted as a match. (B) Comparison of AUCs between the basic classifier, where the weights associated to each HLA-associated TCR are learned using logistic regression, and a simpler classifier that simply counts the number of matches (without weights, i.e. all weights = 1), which was used in [21].

Fig 2

doi: https://doi.org/10.1371/journal.pcbi.1012724.g002