Systematic benchmarking of deep-learning methods for tertiary RNA structure prediction
Table 6
Comparison of RMSD values of the predicted models by the various methods to native structure for targets in the CASP15 dataset.
DRFold has the lowest average RMSD of 22.62 Å, which is slightly better than that of DeepFoldRNA (24.49 Å). ‘best_rmsd_ours’ column denotes the rmsd of the best model predicted by our benchmarking methods and ‘best_rmsd_casp’ column contains the rmsd of the best model from all the methods participating in CASP15. Looking at the ‘best_rmsd_ours’ column clearly shows that we are only able to predict models of reasonably well quality for only three of the seven targets(r1107, r1108 and r1117).