An off-lattice discrete model to characterise filamentous yeast colony morphology
Fig 6
(a) Processed image of the experimental yeast colony in Fig 3f. (b) A binary image of the colony with the occupied central region removed from the image. The red marker is the colony centroid, such that the blue and orange curves indicate rcsr and rmax used to compute the radius ratio. (c) Skeletonised image of (b) obtained using Matlab’s bwmorph() command. This image is used to compute the sub-branch count summary statistic.