EpiFusion: Joint inference of the effective reproduction number by integrating phylodynamic and epidemiological modelling with particle filtering
Table 4
Comparison of the key characteristics of EpiFusion compared to the tools and literature referred to in this manuscript.
Rasmussen’11 denotes Rasmussen et. al (2011), which was referenced in the introduction. However, the model is not distributed for use as a software or program, so we were unable to assess its computational efficiency (*). (BD–birth death).