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EpiFusion: Joint inference of the effective reproduction number by integrating phylodynamic and epidemiological modelling with particle filtering

Fig 8

Estimated mean Rt and 95% HPD intervals for the three validation scenarios from EpiFusion (green), EpiNow2 (blue), BDSky (red) and TimTam (yellow).

doi: https://doi.org/10.1371/journal.pcbi.1012528.g008