Assessing the effect of model specification and prior sensitivity on Bayesian tests of temporal signal
Fig 4
Phylogenetic trees from a simulation replicate with temporal signal.
Highest clade credibility trees from a data set simulated with sampling times (heterochronous) and under a strict molecular clock model (SC). The isochronous trees are inferred by fixing the molecular clock rate to the true value, such that the timescale is in the comparable units to the heterochronous analyses. Unlike the estimates for isochronous trees (e.g. Fig 3), the height of the trees under all scenarios are comparable. Axes and labels are the same as those of Fig 3.