Interpretable online network dictionary learning for inferring long-range chromatin interactions
Table 2
Intersection between the set of genes within the R1-R4 genomic regions and the sets of genes covered by online cvxNDL dictionary elements for chr2L.
We determined the sizes of the intersections of the set of genes covered by each dictionary element and the genes in the R1-R4 genomic region and arranged them in decreasing order. The top 5 dictionary elements in this order cumulatively contain 38 out of the 85 genes within the R1-R4 genomic regions. This is in sharp contrast with randomly generated dictionary elements, where the top 5 elements with maximum intersection cover only 7 genes.