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Reconstruction Set Test (RESET): A computationally efficient method for single sample gene set testing based on randomized reduced rank reconstruction error

Fig 2

Classification performance of RESET.det, RESET.ran, VAM, GSVA, ssGSEA, and PLAGE on scRNA-seq data simulated according to the block design for a single gene set as detailed in the Methods section in S1 Text.

Each panel illustrates the relationship between the area under the receiver operating characteristic curve (AUC) and one of the simulation parameters. The vertical dotted lines mark the default parameter value used in the other panels. Error bars represent the standard error of the mean.

Fig 2

doi: https://doi.org/10.1371/journal.pcbi.1012084.g002