StellarPath: Hierarchical-vertical multi-omics classifier synergizes stable markers and interpretable similarity networks for patient profiling
Fig 2
Violin plot of the classification performances (Table C in S1 Tables) measured with the Matthews Correlation Coefficient (MCC). For netDx, one value of MCC is determined with the predictions made by the classifier applied to one non-pathway consensus PSN for each run of cross-validation. For StellarPath, there are two types of violins. One value of MCC composing a StellarPath GCN violin is determined with the predictions made by a GCN using one pathway-specific PSN. One value of MCC composing a StellarPath Ensemble violin is determined with the predictions made by majority voting from all the trained GCNs. The dot of a violin represents its average.