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Cortical cell assemblies and their underlying connectivity: An in silico study

Fig 2

In vivo-like activity in silico.

A1: Raster plot of the microcircuit’s activity with 628,620 spikes from 98,059 individual neurons and the population firing rates below. The y-axis shows cortical depth. (As cortical layers do not have the same cell density, the visually densest layer is not necessarily the most active—see a2 bottom.) A2: Single cell firing rates (in excitatory and 3 classes of inhibitory cells) and layer-wise inhibitory and excitatory population firing rates in evoked (showed in a1) and spontaneous (not shown) activity. B: Top: pyramid-like overlap setup of VPM patterns, then the centers of the VPM fibers in flat map space. Bottom: raster plots of VPM fibers forming each of the patterns for the stimulus stream in a1 (i.e., from pattern A at 2000 ms to pattern J at 6500 ms). On the right: same for non-specific (POm) input.

Fig 2

doi: https://doi.org/10.1371/journal.pcbi.1011891.g002