Tying the knot: Unraveling the intricacies of the coronavirus frameshift pseudoknot
Fig 10
SARS-CoV-2 long range pseudoknot predictions, 222 nt window via Shapify.
Top arc diagram: MFE-58, free energy −34.16 kcal/mol, initial stem 16 in black (free energy −1.98 kcal/mol). Bottom arc diagram: MFE-10, free energy −42.74 kcal/mol, initial stem 2 in black (free energy −10.08 kcal/mol). Attenuator hairpin sequence in fuchsia, slippery sequence in green, downstream native pseudoknot pairing region in red.