Transcript assembly and annotations: Bias and adjustment
Fig 6
Comparison of the transcripts assembled by Scallop2 and StringTie2 that are annotated by Ensembl but not by RefSeq in each of the five largest biotypes.
The average number over all samples in each dataset is reported in the barplot. The 5 biotypes are ir: retained_intron, pc: protein_coding, lnc: lncRNA (long non-coding RNA), pt: processed_transcript, nmd: nonsense_mediated_decay.