ECOD domain classification of 48 whole proteomes from AlphaFold Structure Database using DPAM2
Fig 2
Most populated ECOD groups of DPAM domains in AlphaFold DB whole proteomes.
A) Relative populations of DPAM domains assigned to ECOD by class (inner pie) and architecture (outer donut). B) Twenty most populated ECOD homologous groups from all AF2 whole proteomes, colored by class. C) An uncharacterized maize CTPR repeat (AFDB: A0A1X7YGI2). Internal repeat proteins (such as CTPR) can be subdivided into smaller repeated domains(d1:red, d2:blue, d3:green). D) Rice disease-related protein 1 (DRP1, AFDB: Q84QL4). The HTH domain of this protein (purple) is shown in the context of other detected domains. E) Fibronectin-binding protein B (FnbpB) of S. aureus (AFDB: Q2G1T5).