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Patch formation driven by stochastic effects of interaction between viruses and defective interfering particles

Fig 2

An illustration of the domain division and interface of the j-th reaction.

Here we show an example with two reactants. The domain is modeled by PDE and the domain is modeled by compartment-based SSA. The amount of each species in a compartment in is . If any reactant amount is below the threshold Θ, then that compartment is part of . Individuals can move between the boundary compartment of and the pseudo-compartment in . In the two-dimensional case, diffusion takes four directions: up, down, left and right.

Fig 2

doi: https://doi.org/10.1371/journal.pcbi.1011513.g002