The first multi-tissue genome-scale metabolic model of a woody plant highlights suberin biosynthesis pathways in Quercus suber
Table 4
General properties of the generic and tissue-specific GSM models. Genes were predicted based on the cork oak genome and then used to develop the GSM model.
Orphan reactions: reactions without gene association (excluding exchange reactions). The reactions were divided according with the respective metabolic role: metabolic (enzymatic and spontaneous) and transport, and the respective compartment. The number of genes, metabolites, and reactions were determined in the generic model and each tissue-specific model, generated with troppo.