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Identifying promoter sequence architectures via a chunking-based algorithm using non-negative matrix factorisation

Fig 13

Additional analyses of seqArchR clusters for H. sapiens.

(A) Per-cluster proportions of ribosomal and other (non-ribosomal) genes (left) and proportions of dual initiation and non-dual initiation promoters (right). (B) Proportion of housekeeping (HK) genes in each cluster with clusters arranged in ascending order of % HK genes (bottom) and absolute numbers (top). (C) The top-5 enriched GO terms for all clusters except C2 and C7–8 which have more than 25% non-promoter CTSSs. seqArchR cluster names correspond to those from Fig 12.

Fig 13

doi: https://doi.org/10.1371/journal.pcbi.1011491.g013