VIRify: An integrated detection, annotation and taxonomic classification pipeline using virus-specific protein profile hidden Markov models
Fig 6
Taxonomic classification of representative sequences from the GPD.
One representative sequence from each of the 57,866 VCs present in the GPD was selected based on their reported CheckV quality and completion values. The representative sequences were analysed with VIRify using the ‘—onlyannotate’ option to obtain taxonomic classifications for them. The taxa displayed in the Sankey plot correspond to those in which at least 10 representative sequences were classified.