Tracking conformational transitions of the gonadotropin hormone receptors in a bilayer of (SDPC) poly-unsaturated lipids from all-atom molecular dynamics simulations
Fig 7
RMSD matrix analysis (gray scale) for the TM helices of the FSHR.
A. replicate R1; B. replicate R2; and C. replicate R3. The corresponding cluster analyses are shown in the insets. Conformations in clusters include structures within 0.5 Å of RMSD among each other. The cluster number is identified in the vertical axis. Horizontal segments along the curve identify the time frames forming a given cluster.