SPIN-CGNN: Improved fixed backbone protein design with contact map-based graph construction and contact graph neural network
Table 6
Comparison of sequences designed by SPIN-CGNN, ProDesign-LE, RosettaFixBB, OSCAR-design, ProDesign-LE, ProteinMPNN, and PiFold on the Hallucination129 and Diffusion100 test sets according to the fraction of Low-Complexity Regions (LCR), the mean steric clash count of refolded structures, and the difference between refolded and target structures in term of RMSD, GDT-TS and TM-score.