Implicit model to capture electrostatic features of membrane environment
Fig 9
Test 5: Sequence recovery of membrane proteins.
Plots show the fraction of native amino acids recovered on the y-axis and the fraction of amino acid types with individual recovery rates greater than 0.05 on the x-axis. An accurate energy function would have a high sequence recovery rate both overall and for the individual amino acid types. The results are shown for all positions in panel (a), buried (in filled circles) vs. surface-exposed(in open circles) positions in (b), lipid-exposed positions in (c), and water exposed in (d).