GenoVi, an open-source automated circular genome visualizer for bacteria and archaea
Fig 2
Application of GenoVi using a draft or complete bacterial genome.
(A) GenoVi circular map of the draft genome of Corynebacterium alimapuense VA37-3T [18] (-s draft -cs paradise). Each contig is represented as separated bands of one circular representation. (B) GenoVi circular representation of the complete genome of Acinetobacter radioresistens DD78 [21] (-s complete, -cs autumn). Each circular map represents a replicon from the complete genome. A. radioresistens DD78 genome consists of a circular chromosome and three circular plasmids displayed next to the chromosome (—scale variable). Labeling from outside to the inside: Contigs; COGs on the forward strand; CDS, tRNAs, and rRNAs on the forward strand; CDS, tRNAs, and rRNAs on the reverse strand; COGs on the reverse strand; GC content; GC skew.