HELIOS: High-speed sequence alignment in optics
Table 15
A brief report of the accuracy measurement of classification output of the HELIOS method with referencing well-known algorithms, including Smith-Waterman, Needleman-Wunsch, ClustalW, ClustalΩ, BLAST, Muscle T-Coffee, Kalign, MAFFT algorithms.
The parameters SEN, Spec, ACC, PPV, NPV, MCC, and F-Score are averaged and reported. The twelve datasets [53, 55–61] are considered.