Accounting for multiple imputation-induced variability for differential analysis in mass spectrometry-based label-free quantitative proteomics
Table 3
Performance of the mi4p methodology expressed in percentage with respect to DAPAR workflow, on Saccharomyces cerevisiae + UPS1 experiment, with Match Between Runs and at least 1 out of 3 quantified values in each condition.
Missing values (6%) were imputed using the maximum likelihood estimation method.