Identification of upstream transcription factor binding sites in orthologous genes using mixed Student’s t-test statistics
Fig 2
Performance assessment of motif scanners in analyzing ReMap datasets.
A total of six scanners (Clover, FIMO, Grit, Pscan, PWMScan, and Swan) were evaluated based on the parameters of sensitivity (Sn), positive predictive value (PPV), geometric accuracy (ACCg), and total number of predicted transcription factor binding sites (TFBS, Count).