Improved transcriptome assembly using a hybrid of long and short reads with StringTie
Fig 3
Precision and the number of annotated transcripts assembled for 9 real datasets from Arabidopsis thaliana, Mus musculus, and human.
Only loci with long read expression are considered for these calculations The circle markers represent assemblies created from uncorrected reads, and the stars represent assemblies created from long-reads corrected with TALC. The long and short read combinations analyzed from Arabidopsis thaliana were A) ERR3486096 and ERR3764345 B) ERR3486098 and ERR3764349 C) ERR3486099 and ERR3764351. The long and short read combinations analyzed from Mus musculus were D) ERR2680378 and ERR2680375 E) ERR2680378 and ERR2680377 F) ERR2680380 and ERR2680379. The long and short read combinations analyzed from human were G) SRR4235527 and NA12878-cDNA H) SRR4235527 and SRR4235527 I) SRR1153470 and SRR1163655.