Reconstructing contact network structure and cross-immunity patterns from multiple infection histories
Fig 2
Genotype diversity index, multiplicity of infection (MOI), and epidemic prevalence as a function of network type and cross-immunity patterns.
The figure shows the output of 50 stochastic epidemics with four genotypes on dispersed and clustered networks (see Table 1), and five immunological interference settings. Black lines show the time-averaged fraction of nodes infected with at least one genotype (95% confidence intervals shaded grey), blue lines show the average genotype diversity index at the population level, and green lines show the average MOI of individual nodes.