scHiCTools: A computational toolbox for analyzing single-cell Hi-C data
Fig 4
Two-dimensional embedding using different dimension reduction methods.
(Dataset: Nagano et al., 2017). (a) Two-dimensional projection from InnerProduct/PHATE shows a circular pattern similiar to MDS projection (ACROC: 0.920). (b) Two-dimensional projection from InnerProduct/t-SNE shows a circular pattern (ACROC: 0.901).