Finding branched pathways in metabolic network via atom group tracking
Fig 3
Branched pathway from pregnenolone to 11beta-Hydroxyprogesterone.
a) The known branched pathway from pregnenolone to 11beta-Hydroxyprogesterone in KEGG. b) The found pathway of BPAT-M. c) The found pathway of BPAT-S. d) The found pathway of Retrace. e) The found pathway of BPFinder. The compounds circled with dashed ellipses are the branched compounds in the pathways. In the found pathways, the reactions that appear with the same substrates and products in the known pathway are drawn in green. The conserved atom groups from pregnenolone in the branched compounds are drawn in red in the dashed rectangles.