MetGEMs Toolbox: Metagenome-scale models as integrative toolbox for uncovering metabolic functions and routes of human gut microbiome
Fig 3
Validated results of MetGEMs toolbox and its prediction capability for metabolic function inferences.
(A) A Spearman’s correlation coefficient (SCC) graph between MetGEMs toolbox’s predicted results compared with shotgun metagenomic results of corresponding samples. Note: A correlation coefficient was analyzed for both predicted KO IDs and EC numbers with 61 selected samples. (B) A horizontal bar chart of predicted KO IDs and functionally metabolic categorized by MetGEMs toolbox.