AnnapuRNA: A scoring function for predicting RNA-small molecule binding poses
Table 2
Average and median values of the lowest RMSD reported for rDock (dock and dock_solv potentials), AutoDock Vina, and iDock.
Values calculated for all structures in the testing set (A), only for structures for which all programs completed docking (B), and only for structures for which RMSD values of poses found by all programs are below or equal 10 Å (C). Docking was performed using a native conformation of a ligand as an input.