Tempora: Cell trajectory inference using time-series single-cell RNA sequencing data
Fig 4
Tempora analysis of the murine cerebellar data set.
a. Tempora trajectory built on clusters in the murine cerebellar data set. b-d. Time-dependent pathways in the murine cerebral cortex data set identified by Tempora’s pathway exploration feature. Blue dots represent clusters/cell types, the black line is the best fit of a generalized additive model (GAM) on the pathway enrichment scores of each pathway across all clusters, and grey areas depict 95% confidence intervals of the fitted model.