Bayesian parameter estimation for automatic annotation of gene functions using observational data and phylogenetic trees
Fig 3
Number of annotated leaves for all 138 trees by type of annotation.
Most of the annotations available in GO are positive assertions of function, that is, 1s. Furthermore, as observed in the figure, all of the trees used in this study have two “Not” (i.e., 0) annotations, which is a direct consequence of the selection criteria used, as we explicitly set a minimum of two annotations of each type per tree+function.