VAMPr: VAriant Mapping and Prediction of antibiotic resistance via explainable features and machine learning
Fig 5
VAMPr provides rich sets of online resources for association models and prediction models.
Users have the flexibility to explore known or novel antibiotic resistance-associated variants, and can upload their own sequence assembly and obtain predictions on antibiotic resistance. (A) association results webpage: users can explore variants, their interpretations, and their statistical significance assessments; (B) detailed information, contingency table and odd-ratio for variant K18768 in the association model, and distribution plots; (C) Distribution plots for variant K18768 in the association model page; (D) prediction models allow for uploads of users’ sequence data for antibiotic resistance prediction.