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Mathematical model studies of the comprehensive generation of major and minor phyllotactic patterns in plants with a predominant focus on orixate phyllotaxis

Fig 3

Color legend for the phyllotactic patterns generated in computer simulations.

The phyllotactic patterns generated in computer simulations were classified into an alternate pattern with a constant divergence angle or a two-cycle change in the divergence angle; a tetrastichous alternate pattern with a four-cycle change in the divergence angle; a whorled pattern; and other patterns. Whorled patterns were further classified into decussate (“opposite phyllotaxis” typified by true decussate), tricussate, and other whorled patterns. These patterns were distinguished using different colors. For regular alternate patterns with a constant divergence angle, the divergence angle was indicated by a color hue from cyan (0°) to red (180°). In the case of alternate patterns with a two-cycle divergence angle change, the color hue was assigned for the mean value of the successive divergence angles. In these two-cycle alternate patterns, small-to-large ratios of two successive plastochron times and two successive divergence angles were represented by lightness (full lightness for 0) and saturation (full saturation for 1), respectively. Tetrastichous alternate patterns with a four-cycle divergence angle change were similarly expressed by color brightness and saturation based on their ratios of plastochron times and divergence angles; however, instead of the divergence angles themselves, the absolute values of divergence angles were used to calculate the ratio of divergence angles. As the divergence angle of this type of alternate pattern changes in the sequence of p, q, −p, and −q (−180°<p,q≤180°), |q|/|p| gives the ratio of the absolute values of divergence angles if |p|>|q|. Typical examples of phyllotactic patterns are marked with circled numbers in the color legend and their schematic diagrams are shown at the bottom.

Fig 3

doi: https://doi.org/10.1371/journal.pcbi.1007044.g003