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Network motifs and their origins

Fig 2

Randomizing matrices with switches.

Switches between one checkerboard configuration to another (see 0s and 1s marked in red) leave the row and column sums of the matrix unchanged. One method to generate a set of random samples from the universe of all possible matrices U(r,c) simply requires implementing a large set of switches to randomly chosen checkerboard configurations in the adjacency matrix.

Fig 2

doi: https://doi.org/10.1371/journal.pcbi.1006749.g002