DeepDrug3D: Classification of ligand-binding pockets in proteins with a convolutional neural network
Table 3
Percentage of binding residues forming specific interactions with ligands.
Binding residues are identified by the class-activation map analysis to be part of the highly discriminative regions of nucleotide- and heme-binding pockets. Three types of interactions reported by the LPC program are considered, hydrogen bonds, aromatic and hydrophobic contacts.