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TAMMiCol: Tool for analysis of the morphology of microbial colonies

Table 1

Summary of the datasets produced by Binder et al. [7].

Shown are the species, nutrient level (ammonium sulfate), number of samples, number of observation times, and the mean percentage difference between the TAMMiCol and manual images, along with the corresponding mean percentage differences , and when using Otsu’s method [13], k-means++ clustering [16, 38] and the Ridler–Calvard method [14], respectively.

doi: https://doi.org/10.1371/journal.pcbi.1006629.t001