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TAMMiCol: Tool for analysis of the morphology of microbial colonies

Fig 6

Examples of other colony types processed by TAMMiCol.

Shown are (a) an S. cerevisiae biofilm and (c) a B. subtilis colony, along with the colony shown in green as identified by TAMMiCol (b and d, respectively). In each case, the colony is identified with a high degree of accuracy, demonstrating the versatility of the software. Fig. 6(a and b) was produced by Tam et al. [34]. Fig. 6(c and d) is reprinted from the Journal of the Physical Society of Japan, 58(11), Hiroshi Fujikawa and Mitsugu Matsushita, Fractal Growth of Bacillus subtilis on Agar Plates, 3875–3879, 1989 and is reproduced under a Creative Commons Attribution licence (CC BY 4.0).

Fig 6

doi: https://doi.org/10.1371/journal.pcbi.1006629.g006