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A k-mer-based method for the identification of phenotype-associated genomic biomarkers and predicting phenotypes of sequenced bacteria

Table 2

PhenotypeSeeker comparison to Kover and SEER using P. aeruginosa and C. difficile data.

PhenotypeSeeker with the weighting option and maximum 1000 k-mers for the regression model was used.

doi: https://doi.org/10.1371/journal.pcbi.1006434.t002