A k-mer-based method for the identification of phenotype-associated genomic biomarkers and predicting phenotypes of sequenced bacteria
Fig 3
The positions of ciprofloxacin-resistant P. aeruginosa strains on cladogram.
The MIC values (mg/l) are marked to the external nodes with corresponding strain names. Strains with MIC > 0.5 mg/l are highlighted with yellow to denote ciprofloxacin resistance according to EUCAST breakpoints [16]. Strains with detected mutations in QRDR of gyrA and parC are marked with the color code on the perimeter of the cladogram.