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Stochastic shielding and edge importance for Markov chains with timescale separation

Fig 6

All possible cases for the 3-state chain with middle state 2 conducting.

In this case there are no hidden transitions, and hence no stochastic shielding effect. Left column: 3-state diagram with accelerated/decelerated edges labeled as 1 or α where α ∈ [10−4, 104]. Middle column: logarithm of ratio of the two non-zero eigenvalues (λ23) versus α. This shows the timescale separation (present when λ23 ≪ 1). Right column: relative edge importance Rk versus α.

Fig 6

doi: https://doi.org/10.1371/journal.pcbi.1006206.g006