PhysiCell: An open source physics-based cell simulator for 3-D multicellular systems
Fig 4
HDS computational cost scaling.
Left: Wall-time vs. cell count for the stochastic (red) and deterministic (blue) necrosis necrosis models on a single HPC compute node. Both models show approximately linear cost scaling with the number of cell agents. Right: Wall time vs. cell count for stochastic necrosis model on the desktop workstation (orange) and the single HPC node (green).