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Automated visualization of rule-based models

Fig 7

FcεRI library of rules.

Compressed AR graph (63 nodes, 112 edges) generated from the FcεRI model of Chylek et al. [10] with 178 rules. The uncompressed graph has 305 nodes and 1076 edges. The model elements can be roughly classified into six subsystems shown above. The files needed to reproduce this diagram are provided in S1 Dataset.

Fig 7

doi: https://doi.org/10.1371/journal.pcbi.1005857.g007