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mixOmics: An R package for ‘omics feature selection and multiple data integration

Fig 2

Prediction area visualisation on the Small Round Blue Cell Tumors data (SRBCT [35]) data, described in the Results Section, with respect to the prediction distance.

From left to right: ‘maximum distance’, ‘Centroid distance’ and ‘Mahalanobis distance’. Sample prediction area plots from a PLS-DA model applied on a microarray data set with the expression levels of 2,308 genes on 63 samples. Samples are classified into four classes: Burkitt Lymphoma (BL), Ewing Sarcoma (EWS), Neuroblastoma (NB), and Rhabdomyosarcoma (RMS).

Fig 2

doi: https://doi.org/10.1371/journal.pcbi.1005752.g002