Stochastic Simulation Service: Bridging the Gap between the Computational Expert and the Biologist
Fig 1
Process flow and component diagram for a modeling and simulation workflow with StochSS.
The biochemical model and domain is defined as part of the problem specification. The ODE, spatial stochastic, and well-mixed simulation tools generate realizations of these models. The parameter estimation and parameter sensitivity tools allow for analysis of models. The output and visualization tools present the data.