Multiscale Embedded Gene Co-expression Network Analysis
Fig 9
Hierarchical organization of functions and signaling pathways corresponding to the multiscale clusters identified by MEGENA.
A) Comparison of number of significantly enriched functions and pathway signatures across clusters identified at different scale groups. The scale groups identified from MHA are colored according to the legend, and “all” denotes collection of clusters across the scale groups. B) Multiscale organization of clusters in PFN. Each node is a cluster identified by multiscale clustering in PFN, where the node size is proportional to the cluster size, node color coincides with the cluster group color scheme in A, and node labels indicate most enriched function/signaling pathway for individual clusters. A directed link a→b indicates b is a sub-cluster of a.