Informatics for RNA Sequencing: A Web Resource for Analysis on the Cloud
Fig 2
A typical RNA-seq experimental workflow involves the isolation of RNA from samples of interest, generation of sequencing libraries, use of a high-throughput sequencer to produce hundreds of millions of short paired-end reads, alignment of reads against a reference genome or transcriptome, and downstream analysis for expression estimation, differential expression, transcript isoform discovery, and other applications. Refer to S1 Table, S3 Table, and S7 Table for more details on the concepts depicted in this figure.